A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv2920954



Internal ID15585801
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:69525761..69558721hg38UCSC Ensembl
Innerchr5:68821588..68854548hg19UCSC Ensembl
Innerchr5:68857344..68890304hg18UCSC Ensembl
Cytoband5q13.2
Allele length
AssemblyAllele length
hg3832961
hg1932961
hg1832961
Variant TypeCNV loss
Copy Number1
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv514309
Supporting Variants
SamplesHGDP00716
Known GenesLOC647859, OCLN, SMA4
MethodOligo aCGH
AnalysisADM2 threshold = 5
PlatformAgilent Eichler Human CNP 180K v3.0
Comments
ReferenceCampbell_et_al_2011
Pubmed ID21397061
Accession Number(s)nssv2920954
Frequency
Sample Size2366
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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