A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv29117



Internal ID15837609
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:165546190..165565820hg38UCSC Ensembl
Outerchr3:165544207..165578840hg38UCSC Ensembl
Innerchr3:165263978..165283608hg19UCSC Ensembl
Outerchr3:165261995..165296628hg19UCSC Ensembl
Innerchr3:166746672..166766302hg18UCSC Ensembl
Outerchr3:166744689..166779322hg18UCSC Ensembl
Innerchr3:166746680..166766310hg17UCSC Ensembl
Outerchr3:166744697..166779330hg17UCSC Ensembl
Cytoband3q26.1
Allele length
AssemblyAllele length
hg3834634
hg1934634
hg1834634
hg1734634
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10354
Supporting Variants
SamplesNA18853
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv29117
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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