A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv29060



Internal ID15493184
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:87825805..87958268hg38UCSC Ensembl
Outerchr2:87825731..87962085hg38UCSC Ensembl
Innerchr2:88125324..88257787hg19UCSC Ensembl
Outerchr2:88125250..88261604hg19UCSC Ensembl
Innerchr2:87906439..88038902hg18UCSC Ensembl
Outerchr2:87906365..88042719hg18UCSC Ensembl
Innerchr2:87964586..88097049hg17UCSC Ensembl
Outerchr2:87964512..88100866hg17UCSC Ensembl
Cytoband2p11.2
Allele length
AssemblyAllele length
hg38136355
hg19136355
hg18136355
hg17136355
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10070
Supporting Variants
SamplesNA18972
Known GenesRGPD1, RGPD2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv29060
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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