A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv29031



Internal ID15493544
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:138614..139959hg38UCSC Ensembl
Outerchr3:137828..141096hg38UCSC Ensembl
Innerchr3:180297..181642hg19UCSC Ensembl
Outerchr3:179511..182779hg19UCSC Ensembl
Innerchr3:155297..156642hg18UCSC Ensembl
Outerchr3:154511..157779hg18UCSC Ensembl
Innerchr3:155297..156642hg17UCSC Ensembl
Outerchr3:154511..157779hg17UCSC Ensembl
Cytoband3p26.3
Allele length
AssemblyAllele length
hg383269
hg193269
hg183269
hg173269
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10236
Supporting Variants
SamplesNA18975
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv29031
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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