A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv28735



Internal ID15829726
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:6609744..6612574hg38UCSC Ensembl
Outerchr3:6476182..6613293hg38UCSC Ensembl
Innerchr3:6651431..6654261hg19UCSC Ensembl
Outerchr3:6517869..6654980hg19UCSC Ensembl
Innerchr3:6626431..6629261hg18UCSC Ensembl
Outerchr3:6492869..6629980hg18UCSC Ensembl
Innerchr3:6626431..6629261hg17UCSC Ensembl
Outerchr3:6492869..6629980hg17UCSC Ensembl
Cytoband3p26.1
Allele length
AssemblyAllele length
hg38137112
hg19137112
hg18137112
hg17137112
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10249
Supporting Variants
SamplesNA10863
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv28735
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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