A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv28365



Internal ID15843623
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:64878138..64882786hg38UCSC Ensembl
Outerchr17:64877552..64883787hg38UCSC Ensembl
Innerchr17:62874256..62878904hg19UCSC Ensembl
Outerchr17:62873670..62879905hg19UCSC Ensembl
Innerchr17:60304718..60309366hg18UCSC Ensembl
Outerchr17:60304132..60310367hg18UCSC Ensembl
Innerchr17:60304718..60309366hg17UCSC Ensembl
Outerchr17:60304132..60310367hg17UCSC Ensembl
Cytoband17q24.1
Allele length
AssemblyAllele length
hg386236
hg196236
hg186236
hg176236
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9585
Supporting Variants
SamplesNA19221
Known GenesLRRC37A3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv28365
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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