A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv28167



Internal ID15844035
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:11135515..11137783hg38UCSC Ensembl
Outerchr17:11134540..11194389hg38UCSC Ensembl
Innerchr17:11038832..11041100hg19UCSC Ensembl
Outerchr17:11037857..11097706hg19UCSC Ensembl
Innerchr17:10979557..10981825hg18UCSC Ensembl
Outerchr17:10978582..11038431hg18UCSC Ensembl
Innerchr17:10979557..10981825hg17UCSC Ensembl
Outerchr17:10978582..11038431hg17UCSC Ensembl
Cytoband17p12
Allele length
AssemblyAllele length
hg3859850
hg1959850
hg1859850
hg1759850
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9492
Supporting Variants
SamplesNA19221
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv28167
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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