A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv28131



Internal ID15497266
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:89573333..89586703hg38UCSC Ensembl
Outerchr16:89572391..89587552hg38UCSC Ensembl
Innerchr16:89639741..89653111hg19UCSC Ensembl
Outerchr16:89638799..89653960hg19UCSC Ensembl
Innerchr16:88167242..88180612hg18UCSC Ensembl
Outerchr16:88166300..88181461hg18UCSC Ensembl
Innerchr16:88167242..88180612hg17UCSC Ensembl
Outerchr16:88166300..88181461hg17UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg3815162
hg1915162
hg1815162
hg1715162
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9477
Supporting Variants
SamplesNA19221
Known GenesCPNE7
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv28131
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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