A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv28090



Internal ID15831690
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:37938399..37945267hg38UCSC Ensembl
Outerchr3:37936909..37946039hg38UCSC Ensembl
Innerchr3:37979890..37986758hg19UCSC Ensembl
Outerchr3:37978400..37987530hg19UCSC Ensembl
Innerchr3:37954894..37961762hg18UCSC Ensembl
Outerchr3:37953404..37962534hg18UCSC Ensembl
Innerchr3:37954894..37961762hg17UCSC Ensembl
Outerchr3:37953404..37962534hg17UCSC Ensembl
Cytoband3p22.2
Allele length
AssemblyAllele length
hg389131
hg199131
hg189131
hg179131
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10263
Supporting Variants
SamplesNA12802
Known GenesCTDSPL
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv28090
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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