A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27989



Internal ID15833544
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:26124254..26124269hg38UCSC Ensembl
OuterchrY:26123501..26124609hg38UCSC Ensembl
InnerchrY:28270401..28270416hg19UCSC Ensembl
OuterchrY:28269648..28270756hg19UCSC Ensembl
InnerchrY:26679789..26679804hg18UCSC Ensembl
OuterchrY:26679036..26680144hg18UCSC Ensembl
InnerchrY:26608526..26608541hg17UCSC Ensembl
OuterchrY:26607773..26608881hg17UCSC Ensembl
CytobandYq11.23
Allele length
AssemblyAllele length
hg381109
hg191109
hg181109
hg171109
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10040
Supporting Variants
SamplesNA18504
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27989
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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