A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27981



Internal ID15491900
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr21:10421713..10422885hg38UCSC Ensembl
Outerchr21:10421208..10423584hg38UCSC Ensembl
Innerchr21:11089572..11090744hg19UCSC Ensembl
Outerchr21:11088873..11091249hg19UCSC Ensembl
Innerchr21:10111443..10112615hg18UCSC Ensembl
Outerchr21:10110744..10113120hg18UCSC Ensembl
Innerchr21:10111443..10112615hg17UCSC Ensembl
Outerchr21:10110744..10113120hg17UCSC Ensembl
Cytoband21p11.1
Allele length
AssemblyAllele length
hg382377
hg192377
hg182377
hg172377
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9838
Supporting Variants
SamplesNA18860
Known GenesBAGE, BAGE2, BAGE3, BAGE4, BAGE5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27981
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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