A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27909



Internal ID15833496
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:21936552..21936567hg38UCSC Ensembl
OuterchrY:21936212..21937320hg38UCSC Ensembl
InnerchrY:24082699..24082714hg19UCSC Ensembl
OuterchrY:24082359..24083467hg19UCSC Ensembl
InnerchrY:22492087..22492102hg18UCSC Ensembl
OuterchrY:22491747..22492855hg18UCSC Ensembl
InnerchrY:22420824..22420839hg17UCSC Ensembl
OuterchrY:22420484..22421592hg17UCSC Ensembl
CytobandYq11.223
Allele length
AssemblyAllele length
hg381109
hg191109
hg181109
hg171109
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10027
Supporting Variants
SamplesNA18504
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27909
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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