A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27897



Internal ID15487027
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:18891495..20780106hg38UCSC Ensembl
OuterchrY:18865177..20859250hg38UCSC Ensembl
InnerchrY:21053381..22941992hg19UCSC Ensembl
OuterchrY:21027063..23021136hg19UCSC Ensembl
InnerchrY:19512769..21351380hg18UCSC Ensembl
OuterchrY:19486451..21430524hg18UCSC Ensembl
InnerchrY:19441506..21280117hg17UCSC Ensembl
OuterchrY:19415188..21359261hg17UCSC Ensembl
CytobandYq11.222
Allele length
AssemblyAllele length
hg381994074
hg191994074
hg181944074
hg171944074
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10025
Supporting Variants
SamplesNA18504
Known GenesBCORP1, CD24, EIF1AY, KDM5D, NCRNA00185, RPS4Y2, TTTY10, TTTY14, TXLNG2P
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27897
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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