A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27885



Internal ID15833239
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:18533077..18546596hg38UCSC Ensembl
OuterchrY:18532698..18546942hg38UCSC Ensembl
InnerchrY:20694963..20708482hg19UCSC Ensembl
OuterchrY:20694584..20708828hg19UCSC Ensembl
InnerchrY:19154351..19167870hg18UCSC Ensembl
OuterchrY:19153972..19168216hg18UCSC Ensembl
InnerchrY:19083088..19096607hg17UCSC Ensembl
OuterchrY:19082709..19096953hg17UCSC Ensembl
CytobandYq11.222
Allele length
AssemblyAllele length
hg3814245
hg1914245
hg1814245
hg1714245
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10022
Supporting Variants
SamplesNA18504
Known GenesHSFY1, HSFY2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27885
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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