A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27852



Internal ID15838020
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:54227037..54239339hg38UCSC Ensembl
Outerchr19:54226155..54239834hg38UCSC Ensembl
Innerchr19:54730910..54743215hg19UCSC Ensembl
Outerchr19:54730028..54743710hg19UCSC Ensembl
Innerchr19:59422722..59435027hg18UCSC Ensembl
Outerchr19:59421840..59435522hg18UCSC Ensembl
Innerchr19:59422722..59435027hg17UCSC Ensembl
Outerchr19:59421840..59435522hg17UCSC Ensembl
Cytoband19q13.42
Allele length
AssemblyAllele length
hg3813680
hg1913683
hg1813683
hg1713683
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9752
Supporting Variants
SamplesNA18860
Known GenesLILRA6
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27852
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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