A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27806



Internal ID15833417
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:6273914..6280149hg38UCSC Ensembl
OuterchrY:6273091..6280928hg38UCSC Ensembl
InnerchrY:6141955..6148190hg19UCSC Ensembl
OuterchrY:6141132..6148969hg19UCSC Ensembl
InnerchrY:6201955..6208190hg18UCSC Ensembl
OuterchrY:6201132..6208969hg18UCSC Ensembl
InnerchrY:6185316..6191551hg17UCSC Ensembl
OuterchrY:6184493..6192330hg17UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg387838
hg197838
hg187838
hg177838
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10014
Supporting Variants
SamplesNA18504
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27806
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer