A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27785



Internal ID15833880
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:3852828..4246324hg38UCSC Ensembl
OuterchrY:3729383..4669956hg38UCSC Ensembl
InnerchrY:3720869..4114365hg19UCSC Ensembl
OuterchrY:3597424..4537997hg19UCSC Ensembl
InnerchrY:3780869..4174365hg18UCSC Ensembl
OuterchrY:3657424..4597997hg18UCSC Ensembl
InnerchrY:3764230..4157726hg17UCSC Ensembl
OuterchrY:3640785..4581358hg17UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg38940574
hg19940574
hg18940574
hg17940574
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10011
Supporting Variants
SamplesNA18504
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27785
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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