A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27681



Internal ID15483886
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:23232364..23282787hg38UCSC Ensembl
OuterchrY:23231872..23283280hg38UCSC Ensembl
InnerchrY:25378511..25428934hg19UCSC Ensembl
OuterchrY:25378019..25429427hg19UCSC Ensembl
InnerchrY:23787899..23838322hg18UCSC Ensembl
OuterchrY:23787407..23838815hg18UCSC Ensembl
InnerchrY:23716636..23767059hg17UCSC Ensembl
OuterchrY:23716144..23767552hg17UCSC Ensembl
CytobandYq11.223
Allele length
AssemblyAllele length
hg3851409
hg1951409
hg1851409
hg1751409
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10034
Supporting Variants
SamplesNA12155
Known GenesDAZ2, DAZ3, DAZ4
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27681
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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