A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27647



Internal ID15841794
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:15821725..15882972hg38UCSC Ensembl
Outerchr22:15821679..15883341hg38UCSC Ensembl
Innerchr22:16094991..16156238hg19UCSC Ensembl
Outerchr22:16094622..16156284hg19UCSC Ensembl
Innerchr22:14474991..14536238hg18UCSC Ensembl
Outerchr22:14474622..14536284hg18UCSC Ensembl
Innerchr22:14474991..14536238hg17UCSC Ensembl
Outerchr22:14474622..14536284hg17UCSC Ensembl
Cytoband22q11.1
Allele length
AssemblyAllele length
hg3861663
hg1961663
hg1861663
hg1761663
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9866
Supporting Variants
SamplesNA19132
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27647
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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