A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27578



Internal ID15496824
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:84527916..84548720hg38UCSC Ensembl
Outerchr15:84516232..84550083hg38UCSC Ensembl
Innerchr15:85071147..85091951hg19UCSC Ensembl
Outerchr15:85059463..85093314hg19UCSC Ensembl
Innerchr15:82872151..82892955hg18UCSC Ensembl
Outerchr15:82860467..82894318hg18UCSC Ensembl
Innerchr15:82872151..82892955hg17UCSC Ensembl
Outerchr15:82860467..82894318hg17UCSC Ensembl
Cytoband15q25.2
Allele length
AssemblyAllele length
hg3833852
hg1933852
hg1833852
hg1733852
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9290
Supporting Variants
SamplesNA19221
Known GenesGOLGA6L5P, UBE2Q2P1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27578
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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