A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27546



Internal ID15843694
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:56426809..56467737hg38UCSC Ensembl
Outerchr15:56394748..56468222hg38UCSC Ensembl
Innerchr15:56719007..56759935hg19UCSC Ensembl
Outerchr15:56686946..56760420hg19UCSC Ensembl
Innerchr15:54506299..54547227hg18UCSC Ensembl
Outerchr15:54474238..54547712hg18UCSC Ensembl
Innerchr15:54506299..54547227hg17UCSC Ensembl
Outerchr15:54474238..54547712hg17UCSC Ensembl
Cytoband15q21.3
Allele length
AssemblyAllele length
hg3873475
hg1973475
hg1873475
hg1773475
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9270
Supporting Variants
SamplesNA19221
Known GenesMNS1, TEX9
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27546
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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