A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27541



Internal ID15833760
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrX:71706307..71737000hg38UCSC Ensembl
OuterchrX:71702786..71739806hg38UCSC Ensembl
InnerchrX:70926157..70956850hg19UCSC Ensembl
OuterchrX:70922636..70959656hg19UCSC Ensembl
InnerchrX:70842882..70873575hg18UCSC Ensembl
OuterchrX:70839361..70876381hg18UCSC Ensembl
InnerchrX:70709178..70739871hg17UCSC Ensembl
OuterchrX:70705657..70742677hg17UCSC Ensembl
CytobandXq13.1
Allele length
AssemblyAllele length
hg3837021
hg1937021
hg1837021
hg1737021
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9952
Supporting Variants
SamplesNA18504
Known GenesBCYRN1, CXorf49, CXorf49B, LINC00891, LOC100132741
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27541
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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