A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27460



Internal ID15497126
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:41819075..41865150hg38UCSC Ensembl
Outerchr15:41818514..41916607hg38UCSC Ensembl
Innerchr15:42111273..42157348hg19UCSC Ensembl
Outerchr15:42110712..42208805hg19UCSC Ensembl
Innerchr15:39898565..39944640hg18UCSC Ensembl
Outerchr15:39898004..39996097hg18UCSC Ensembl
Innerchr15:39898565..39944640hg17UCSC Ensembl
Outerchr15:39898004..39996097hg17UCSC Ensembl
Cytoband15q15.1
Allele length
AssemblyAllele length
hg3898094
hg1998094
hg1898094
hg1798094
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9244
Supporting Variants
SamplesNA19221
Known GenesEHD4, JMJD7, JMJD7-PLA2G4B, MAPKBP1, MIR4310, PLA2G4B, SPTBN5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27460
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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