A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27444



Internal ID15497017
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:32491150..32586351hg38UCSC Ensembl
Outerchr15:32489759..32586785hg38UCSC Ensembl
Innerchr15:32783351..32878552hg19UCSC Ensembl
Outerchr15:32781960..32878986hg19UCSC Ensembl
Innerchr15:30570643..30665844hg18UCSC Ensembl
Outerchr15:30569252..30666278hg18UCSC Ensembl
Innerchr15:30570643..30665844hg17UCSC Ensembl
Outerchr15:30569252..30666278hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg3897027
hg1997027
hg1897027
hg1797027
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9238
Supporting Variants
SamplesNA19221
Known GenesLOC100996255, WHAMMP1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27444
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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