A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27378



Internal ID15497610
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:32250588..32317332hg38UCSC Ensembl
Outerchr15:32250405..32318114hg38UCSC Ensembl
Innerchr15:32542789..32609533hg19UCSC Ensembl
Outerchr15:32542606..32610315hg19UCSC Ensembl
Innerchr15:30330081..30396825hg18UCSC Ensembl
Outerchr15:30329898..30397607hg18UCSC Ensembl
Innerchr15:30330081..30396825hg17UCSC Ensembl
Outerchr15:30329898..30397607hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg3867710
hg1967710
hg1867710
hg1767710
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9238
Supporting Variants
SamplesNA19221
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27378
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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