A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27360



Internal ID15497451
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30592682..30598727hg38UCSC Ensembl
Outerchr15:30592180..30598751hg38UCSC Ensembl
Innerchr15:30884885..30890930hg19UCSC Ensembl
Outerchr15:30884383..30890954hg19UCSC Ensembl
Innerchr15:28672177..28678222hg18UCSC Ensembl
Outerchr15:28671675..28678246hg18UCSC Ensembl
Innerchr15:28672177..28678222hg17UCSC Ensembl
Outerchr15:28671675..28678246hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg386572
hg196572
hg186572
hg176572
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA19221
Known GenesULK4P1, ULK4P2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27360
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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