A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27351



Internal ID15497362
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30572928..30584382hg38UCSC Ensembl
Outerchr15:30572450..30584596hg38UCSC Ensembl
Innerchr15:30865131..30876585hg19UCSC Ensembl
Outerchr15:30864653..30876799hg19UCSC Ensembl
Innerchr15:28652423..28663877hg18UCSC Ensembl
Outerchr15:28651945..28664091hg18UCSC Ensembl
Innerchr15:28652423..28663877hg17UCSC Ensembl
Outerchr15:28651945..28664091hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg3812147
hg1912147
hg1812147
hg1712147
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA19221
Known GenesULK4P1, ULK4P2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27351
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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