A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27342



Internal ID15497268
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30536418..30536958hg38UCSC Ensembl
Outerchr15:30536015..30537462hg38UCSC Ensembl
Innerchr15:30828621..30829161hg19UCSC Ensembl
Outerchr15:30828218..30829665hg19UCSC Ensembl
Innerchr15:28615913..28616453hg18UCSC Ensembl
Outerchr15:28615510..28616957hg18UCSC Ensembl
Innerchr15:28615913..28616453hg17UCSC Ensembl
Outerchr15:28615510..28616957hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg381448
hg191448
hg181448
hg171448
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA19221
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27342
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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