A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27315



Internal ID15497186
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30324309..30331218hg38UCSC Ensembl
Outerchr15:30323562..30331526hg38UCSC Ensembl
Innerchr15:30616512..30623421hg19UCSC Ensembl
Outerchr15:30615765..30623729hg19UCSC Ensembl
Innerchr15:28403804..28410713hg18UCSC Ensembl
Outerchr15:28403057..28411021hg18UCSC Ensembl
Innerchr15:28403804..28410713hg17UCSC Ensembl
Outerchr15:28403057..28411021hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg387965
hg197965
hg187965
hg177965
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA19221
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27315
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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