A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27261



Internal ID15833807
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:15516056..15891723hg38UCSC Ensembl
Outerchr22:15515364..15891961hg38UCSC Ensembl
Innerchr22:16086240..16461907hg19UCSC Ensembl
Outerchr22:16086002..16462599hg19UCSC Ensembl
Innerchr22:14466240..14841907hg18UCSC Ensembl
Outerchr22:14466002..14842599hg18UCSC Ensembl
Innerchr22:14466240..14836461hg17UCSC Ensembl
Outerchr22:14466002..14837153hg17UCSC Ensembl
Cytoband22q11.1
Allele length
AssemblyAllele length
hg38376598
hg19376598
hg18376598
hg17371152
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9866
Supporting Variants
SamplesNA18504
Known GenesBMS1P17, BMS1P18, OR11H1, POTEH
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27261
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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