A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27143



Internal ID15482796
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr2:87845855..87958268hg38UCSC Ensembl
Outerchr2:87827141..87962085hg38UCSC Ensembl
Innerchr2:88145374..88257787hg19UCSC Ensembl
Outerchr2:88126660..88261604hg19UCSC Ensembl
Innerchr2:87926489..88038902hg18UCSC Ensembl
Outerchr2:87907775..88042719hg18UCSC Ensembl
Innerchr2:87984636..88097049hg17UCSC Ensembl
Outerchr2:87965922..88100866hg17UCSC Ensembl
Cytoband2p11.2
Allele length
AssemblyAllele length
hg38134945
hg19134945
hg18134945
hg17134945
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10070
Supporting Variants
SamplesNA10863
Known GenesRGPD1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27143
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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