A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv27007



Internal ID15844189
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:22015979..22214001hg38UCSC Ensembl
Outerchr15:22015551..22214331hg38UCSC Ensembl
Innerchr15:22303930..22501952hg19UCSC Ensembl
Outerchr15:22303502..22502282hg19UCSC Ensembl
Innerchr15:19805294..20003316hg18UCSC Ensembl
Outerchr15:19804866..20003646hg18UCSC Ensembl
Innerchr15:19805294..20003316hg17UCSC Ensembl
Outerchr15:19804866..20003646hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg38198781
hg19198781
hg18198781
hg17198781
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA19221
Known GenesLOC727924, OR4M2, OR4N3P, OR4N4
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv27007
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer