A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26989



Internal ID15484098
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr21:10405878..10407399hg38UCSC Ensembl
Outerchr21:10403248..10414385hg38UCSC Ensembl
Innerchr21:11105058..11106579hg19UCSC Ensembl
Outerchr21:11098072..11109209hg19UCSC Ensembl
Innerchr21:10126929..10128450hg18UCSC Ensembl
Outerchr21:10119943..10131080hg18UCSC Ensembl
Innerchr21:10126929..10128450hg17UCSC Ensembl
Outerchr21:10119943..10131080hg17UCSC Ensembl
Cytoband21p11.1
Allele length
AssemblyAllele length
hg3811138
hg1911138
hg1811138
hg1711138
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9838
Supporting Variants
SamplesNA12155
Known GenesBAGE, BAGE2, BAGE3, BAGE4, BAGE5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26989
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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