A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26905



Internal ID15830736
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr20:1606050..1606233hg38UCSC Ensembl
Outerchr20:1605585..1606758hg38UCSC Ensembl
Innerchr20:1586696..1586879hg19UCSC Ensembl
Outerchr20:1586231..1587404hg19UCSC Ensembl
Innerchr20:1534696..1534879hg18UCSC Ensembl
Outerchr20:1534231..1535404hg18UCSC Ensembl
Innerchr20:1534696..1534879hg17UCSC Ensembl
Outerchr20:1534231..1535404hg17UCSC Ensembl
Cytoband20p13
Allele length
AssemblyAllele length
hg381174
hg191174
hg181174
hg171174
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9777
Supporting Variants
SamplesNA12155
Known GenesSIRPB1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26905
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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