A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26877



Internal ID15481716
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:909418..909902hg38UCSC Ensembl
Outerchr1:908891..910952hg38UCSC Ensembl
Innerchr1:844798..845282hg19UCSC Ensembl
Outerchr1:844271..846332hg19UCSC Ensembl
Innerchr1:834661..835145hg18UCSC Ensembl
Outerchr1:834134..836195hg18UCSC Ensembl
Innerchr1:884661..885145hg17UCSC Ensembl
Outerchr1:884134..886195hg17UCSC Ensembl
Cytoband1p36.33
Allele length
AssemblyAllele length
hg382062
hg192062
hg182062
hg172062
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10161
Supporting Variants
SamplesNA10839
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26877
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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