A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26842



Internal ID15496362
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:23232364..23279611hg38UCSC Ensembl
OuterchrY:23231872..23280494hg38UCSC Ensembl
InnerchrY:25378511..25425758hg19UCSC Ensembl
OuterchrY:25378019..25426641hg19UCSC Ensembl
InnerchrY:23787899..23835146hg18UCSC Ensembl
OuterchrY:23787407..23836029hg18UCSC Ensembl
InnerchrY:23716636..23763883hg17UCSC Ensembl
OuterchrY:23716144..23764766hg17UCSC Ensembl
CytobandYq11.223
Allele length
AssemblyAllele length
hg3848623
hg1948623
hg1848623
hg1748623
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10034
Supporting Variants
SamplesNA19173
Known GenesDAZ2, DAZ3, DAZ4
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26842
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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