A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26686



Internal ID15835984
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:25993403..25999286hg38UCSC Ensembl
OuterchrY:25992440..26000394hg38UCSC Ensembl
InnerchrY:28139550..28145433hg19UCSC Ensembl
OuterchrY:28138587..28146541hg19UCSC Ensembl
InnerchrY:26548938..26554821hg18UCSC Ensembl
OuterchrY:26547975..26555929hg18UCSC Ensembl
InnerchrY:26477675..26483558hg17UCSC Ensembl
OuterchrY:26476712..26484666hg17UCSC Ensembl
CytobandYq11.23
Allele length
AssemblyAllele length
hg387955
hg197955
hg187955
hg177955
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10038
Supporting Variants
SamplesNA18563
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26686
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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