A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26677



Internal ID15841797
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:13719345..13720306hg38UCSC Ensembl
Outerchr17:13718860..13721344hg38UCSC Ensembl
Innerchr17:13622662..13623623hg19UCSC Ensembl
Outerchr17:13622177..13624661hg19UCSC Ensembl
Innerchr17:13563387..13564348hg18UCSC Ensembl
Outerchr17:13562902..13565386hg18UCSC Ensembl
Innerchr17:13563387..13564348hg17UCSC Ensembl
Outerchr17:13562902..13565386hg17UCSC Ensembl
Cytoband17p12
Allele length
AssemblyAllele length
hg382485
hg192485
hg182485
hg172485
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9494
Supporting Variants
SamplesNA19132
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26677
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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