A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26652



Internal ID15842550
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:15521148..15882972hg38UCSC Ensembl
Outerchr22:15518025..15883341hg38UCSC Ensembl
Innerchr22:16094991..16456815hg19UCSC Ensembl
Outerchr22:16094622..16459938hg19UCSC Ensembl
Innerchr22:14474991..14836815hg18UCSC Ensembl
Outerchr22:14474622..14839938hg18UCSC Ensembl
Innerchr22:14474991..14831369hg17UCSC Ensembl
Outerchr22:14474622..14834492hg17UCSC Ensembl
Cytoband22q11.1
Allele length
AssemblyAllele length
hg38365317
hg19365317
hg18365317
hg17359871
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9866
Supporting Variants
SamplesNA19144
Known GenesBMS1P17, BMS1P18, OR11H1, POTEH
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26652
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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