A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26622



Internal ID15489336
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:22854177..23028189hg38UCSC Ensembl
OuterchrY:22853954..23028292hg38UCSC Ensembl
InnerchrY:25000324..25174336hg19UCSC Ensembl
OuterchrY:25000101..25174439hg19UCSC Ensembl
InnerchrY:23409712..23583724hg18UCSC Ensembl
OuterchrY:23409489..23583827hg18UCSC Ensembl
InnerchrY:23338449..23512461hg17UCSC Ensembl
OuterchrY:23338226..23512564hg17UCSC Ensembl
CytobandYq11.223
Allele length
AssemblyAllele length
hg38174339
hg19174339
hg18174339
hg17174339
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10034
Supporting Variants
SamplesNA18563
Known GenesBPY2, BPY2B, BPY2C, TTTY4, TTTY4B, TTTY4C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26622
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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