A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26609



Internal ID15489342
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:22846806..22853273hg38UCSC Ensembl
OuterchrY:22844781..22853447hg38UCSC Ensembl
InnerchrY:24992953..24999420hg19UCSC Ensembl
OuterchrY:24990928..24999594hg19UCSC Ensembl
InnerchrY:23402341..23408808hg18UCSC Ensembl
OuterchrY:23400316..23408982hg18UCSC Ensembl
InnerchrY:23331078..23337545hg17UCSC Ensembl
OuterchrY:23329053..23337719hg17UCSC Ensembl
CytobandYq11.223
Allele length
AssemblyAllele length
hg388667
hg198667
hg188667
hg178667
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10034
Supporting Variants
SamplesNA18563
Known GenesTTTY17A, TTTY17B, TTTY17C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26609
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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