A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26590



Internal ID15830546
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:38791217..38791889hg38UCSC Ensembl
Outerchr19:38790905..38792736hg38UCSC Ensembl
Innerchr19:39281857..39282529hg19UCSC Ensembl
Outerchr19:39281545..39283376hg19UCSC Ensembl
Innerchr19:43973697..43974369hg18UCSC Ensembl
Outerchr19:43973385..43975216hg18UCSC Ensembl
Innerchr19:43973697..43974369hg17UCSC Ensembl
Outerchr19:43973385..43975216hg17UCSC Ensembl
Cytoband19q13.2
Allele length
AssemblyAllele length
hg381832
hg191832
hg181832
hg171832
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9720
Supporting Variants
SamplesNA12155
Known GenesLGALS7B
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26590
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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