A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26485



Internal ID15841994
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:69943654..69951048hg38UCSC Ensembl
Outerchr16:69943030..69951891hg38UCSC Ensembl
Innerchr16:69977557..69984951hg19UCSC Ensembl
Outerchr16:69976933..69985794hg19UCSC Ensembl
Innerchr16:68535058..68542452hg18UCSC Ensembl
Outerchr16:68534434..68543295hg18UCSC Ensembl
Innerchr16:68535058..68542452hg17UCSC Ensembl
Outerchr16:68534434..68543295hg17UCSC Ensembl
Cytoband16q22.1
Allele length
AssemblyAllele length
hg388862
hg198862
hg188862
hg178862
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9452
Supporting Variants
SamplesNA19132
Known GenesCLEC18A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26485
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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