A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26429



Internal ID15842519
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr20:1583014..1603536hg38UCSC Ensembl
Outerchr20:1581888..1604127hg38UCSC Ensembl
Innerchr20:1563660..1584182hg19UCSC Ensembl
Outerchr20:1562534..1584773hg19UCSC Ensembl
Innerchr20:1511660..1532182hg18UCSC Ensembl
Outerchr20:1510534..1532773hg18UCSC Ensembl
Innerchr20:1511660..1532182hg17UCSC Ensembl
Outerchr20:1510534..1532773hg17UCSC Ensembl
Cytoband20p13
Allele length
AssemblyAllele length
hg3822240
hg1922240
hg1822240
hg1722240
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9776
Supporting Variants
SamplesNA19144
Known GenesSIRPB1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26429
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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