A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26333



Internal ID15493016
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:33284400..33493920hg38UCSC Ensembl
Outerchr16:33283946..33494276hg38UCSC Ensembl
Innerchr16:33185641..33296387hg19UCSC Ensembl
Outerchr16:33185187..33296743hg19UCSC Ensembl
Innerchr16:33093142..33203888hg18UCSC Ensembl
Outerchr16:33092688..33204244hg18UCSC Ensembl
Innerchr16:33093142..33203888hg17UCSC Ensembl
Outerchr16:33092688..33204244hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg38210331
hg19111557
hg18111557
hg17111557
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA18972
Known GenesTP53TG3, TP53TG3B, TP53TG3C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26333
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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