A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26250



Internal ID15496676
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr21:10424104..10431810hg38UCSC Ensembl
Outerchr21:10423584..10432702hg38UCSC Ensembl
Innerchr21:11080647..11088353hg19UCSC Ensembl
Outerchr21:11079755..11088873hg19UCSC Ensembl
Innerchr21:10102518..10110224hg18UCSC Ensembl
Outerchr21:10101626..10110744hg18UCSC Ensembl
Innerchr21:10102518..10110224hg17UCSC Ensembl
Outerchr21:10101626..10110744hg17UCSC Ensembl
Cytoband21p11.1
Allele length
AssemblyAllele length
hg389119
hg199119
hg189119
hg179119
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9838
Supporting Variants
SamplesNA19173
Known GenesBAGE, BAGE2, BAGE3, BAGE4, BAGE5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26250
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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