A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26246



Internal ID15493011
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32647925..32696139hg38UCSC Ensembl
Outerchr16:32644686..32696528hg38UCSC Ensembl
Innerchr16:32659246..32707460hg19UCSC Ensembl
Outerchr16:32656007..32707849hg19UCSC Ensembl
Innerchr16:32566747..32614961hg18UCSC Ensembl
Outerchr16:32563508..32615350hg18UCSC Ensembl
Innerchr16:32566747..32614961hg17UCSC Ensembl
Outerchr16:32563508..32615350hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3851843
hg1951843
hg1851843
hg1751843
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA18972
Known GenesTP53TG3, TP53TG3B, TP53TG3C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26246
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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