A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26135



Internal ID15834404
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:28404001..28415368hg38UCSC Ensembl
Outerchr16:28403763..28418086hg38UCSC Ensembl
Innerchr16:28415322..28426689hg19UCSC Ensembl
Outerchr16:28415084..28429407hg19UCSC Ensembl
Innerchr16:28322823..28334190hg18UCSC Ensembl
Outerchr16:28322585..28336908hg18UCSC Ensembl
Innerchr16:28322823..28334190hg17UCSC Ensembl
Outerchr16:28322585..28336908hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3814324
hg1914324
hg1814324
hg1714324
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9414
Supporting Variants
SamplesNA18517
Known GenesEIF3C, EIF3CL
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26135
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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