A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26075



Internal ID15831337
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:15513078..15891723hg38UCSC Ensembl
Outerchr22:15512347..15891961hg38UCSC Ensembl
Innerchr22:16086240..16464885hg19UCSC Ensembl
Outerchr22:16086002..16465616hg19UCSC Ensembl
Innerchr22:14466240..14844885hg18UCSC Ensembl
Outerchr22:14466002..14845616hg18UCSC Ensembl
Innerchr22:14466240..14839439hg17UCSC Ensembl
Outerchr22:14466002..14840170hg17UCSC Ensembl
Cytoband22q11.1
Allele length
AssemblyAllele length
hg38379615
hg19379615
hg18379615
hg17374169
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9866
Supporting Variants
SamplesNA12740
Known GenesBMS1P17, BMS1P18, OR11H1, POTEH
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26075
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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