A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv26013



Internal ID15828031
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:6243648..6268985hg38UCSC Ensembl
OuterchrY:6243014..6269355hg38UCSC Ensembl
InnerchrY:6111689..6137026hg19UCSC Ensembl
OuterchrY:6111055..6137396hg19UCSC Ensembl
InnerchrY:6171689..6197026hg18UCSC Ensembl
OuterchrY:6171055..6197396hg18UCSC Ensembl
InnerchrY:6155050..6180387hg17UCSC Ensembl
OuterchrY:6154416..6180757hg17UCSC Ensembl
CytobandYp11.2
Allele length
AssemblyAllele length
hg3826342
hg1926342
hg1826342
hg1726342
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv10012
Supporting Variants
SamplesNA07048
Known GenesTSPY2, TTTY23, TTTY23B
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv26013
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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